1WZM	Hydrolase	date	Mar 06, 2005
title	Thermoactinomyces Vulgaris R-47 Alpha-Amylase II (Tva II) Mu R469k
authors	M.Mizuno, K.Ichikawa, T.Tonozuka, A.Ohtaki, Y.Shimura, S.Kamitori A.Nishikawa, Y.Sakano
compound		source
Molecule: Alpha-Amylase II Chain: A, B Synonym: Neopullulanase 2, Tva II Ec: 3.2.1.135 Engineered: Yes Mutation: Yes		Organism_scientific: Thermoactinomyces Vulgaris Organism_taxid: 2026 Strain: R-47 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Mv1184 Expression_system_vector_type: Plasmid Expression_system_plasmid: Puc119
symmetry	Space Group: P 21 21 21	R_factor 0.216 R_Free 0.293
crystal cell	length a length b length c angle alpha angle beta angle gamma 110.663 115.900 112.594 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	3.20 Å
ligand	CA	enzyme	Hydrolase E.C.3.2.1.135 BRENDA
Gene Ontology	Chain Function Process Component A, B

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (196 Kb) [Save to disk] Biological Unit Coordinates (1wzm.pdb1.gz) 188 Kb LPC: Ligand-Protein Contacts for 1WZM CSU: Contacts of Structural Units for 1WZM Likely Quarternary Molecular Structure file(s) for 1WZM Structure Factors (216 Kb) Retrieve 1WZM in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1WZM from S2C, [Save to disk] Re-refined 1wzm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1WZM in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1WZM

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1WZM, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1wzm_A] [1wzm_B] [1wzm] SWISS-PROT database: [Q08751] Domain organization of [NEPU2_THEVU] by SWISSPFAM Domain found in 1WZM: [Aamy ] by SMART

Other resources with information on 1WZM

Community annotation for 1WZM at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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