1X4Q Rna Binding Protein date May 14, 2005
title Solution Structure Of Pwi Domain In U4u6 Small Nuclear Ribonucleoprotein Prp3(Hprp3)
authors F.He, Y.Muto, M.Inoue, T.Kigawa, M.Shirouzu, T.Terada, S.Yokoyama, Riken Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: U4u6 Small Nuclear Ribonucleoprotein Prp3
Chain: A
Fragment: Pwi Domain
Synonym: Pre-Mrna Splicing Factor 3, U4u6 Snrnp 90 Kda Protein, Hprp3;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Prpf3, Hprp3, Prp3
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P040329-14
Other_details: Cell Free Protein Synthesis
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (468 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 1X4Q
  • Original NMR restraints for 1X4Q from PDB
  • Retrieve 1X4Q in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1X4Q from S2C, [Save to disk]
  • View 1X4Q in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1X4Q
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1X4Q, from MSDmotif at EBI
  • Fold representative 1x4q from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1x4q_A] [1x4q]
  • SWISS-PROT database: [O43395]
  • Domain organization of [PRPF3_HUMAN] by SWISSPFAM
  • Domain found in 1X4Q: [PWI ] by SMART
  • Other resources with information on 1X4Q
  • Community annotation for 1X4Q at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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