1XJD Transferase date Sep 23, 2004
title Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution
authors Z.B.Xu
compound source
Molecule: Protein Kinase C, Theta Type
Chain: A
Fragment: Residues 362-706: Includes Protein Kinase Domain (Residues 380-634);
Synonym: Pkc-Theta, Npkc-Theta
Ec: 2.7.1.-
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Pkc
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21de3
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet16b
Other_details: The Sequence Of This Peptide Can Be Found Naturally In Homo Sapiens (Human).
symmetry Space Group: C 1 2 1
R_factor 0.201 R_Free 0.216
length a length b length c angle alpha angle beta angle gamma
139.566 42.400 67.678 90.00 116.24 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand SEP, STU, TPO BindingDB enzyme Transferase E.C.2.7.1 BRENDA

Primary referenceCatalytic domain crystal structure of protein kinase C-theta (PKCtheta )., Xu ZB, Chaudhary D, Olland S, Wolfrom S, Czerwinski R, Malakian K, Lin L, Stahl ML, Joseph-McCarthy D, Benander C, Fitz L, Greco R, Somers WS, Mosyak L, J Biol Chem 2004 Sep 13;. PMID:15364937
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (56 Kb) [Save to disk]
  • Biological Unit Coordinates (1xjd.pdb1.gz) 51 Kb
  • LPC: Ligand-Protein Contacts for 1XJD
  • CSU: Contacts of Structural Units for 1XJD
  • Likely Quarternary Molecular Structure file(s) for 1XJD
  • Retrieve 1XJD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1XJD from S2C, [Save to disk]
  • View 1XJD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1XJD
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1XJD, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1xjda_, region A [Jmol] [rasmolscript] [script source]
  • Fold representative 1xjd from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1xjd_A] [1xjd]
  • SWISS-PROT database: [Q04759]
  • Domain organization of [KPCT_HUMAN] by SWISSPFAM
  • Domains found in 1XJD: [S_TK_X] [S_TKc ] by SMART
  • Other resources with information on 1XJD
  • Community annotation for 1XJD at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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