1XR1 Transferase date Oct 13, 2004
title Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp A Resolution
authors K.C.Qian, L.Wang, E.R.Hickey, J.Studts, K.Barringer, C.Peng, A.Kro J.Li, A.White, S.Mische, B.Farmer
compound source
Molecule: Proto-Oncogene Serinethreonine-Protein Kinase Pi
Chain: A
Ec: 2.7.1.37
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Pim1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 65
R_factor 0.267 R_Free 0.301
crystal
cell
length a length b length c angle alpha angle beta angle gamma
96.680 96.680 80.020 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.10 Å
ligand ANP, MG enzyme Transferase E.C.2.7.1.37 BRENDA
related structures by homologous chain: 1XQZ, 1YHS
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural basis of constitutive activity and a unique nucleotide binding mode of human pim-1 kinase., Qian KC, Wang L, Hickey ER, Studts J, Barringer K, Peng C, Kronkaitis A, Li J, White A, Mische S, Farmer B, J Biol Chem 2005 Feb 18;280(7):6130-7. Epub 2004 Nov 03. PMID:15525646
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (52 Kb) [Save to disk]
  • Biological Unit Coordinates (1xr1.pdb1.gz) 48 Kb
  • LPC: Ligand-Protein Contacts for 1XR1
  • CSU: Contacts of Structural Units for 1XR1
  • Likely Quarternary Molecular Structure file(s) for 1XR1
  • Structure Factors (565 Kb)
  • Retrieve 1XR1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1XR1 from S2C, [Save to disk]
  • Re-refined 1xr1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1XR1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1XR1
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1XR1, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1xr1a_, region A [Jmol] [rasmolscript] [script source]
  • Fold representative 1xr1 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1xr1] [1xr1_A]
  • SWISS-PROT database: [P11309]
  • Domain organization of [PIM1_HUMAN] by SWISSPFAM
  • Domain found in 1XR1: [S_TKc ] by SMART
  • Other resources with information on 1XR1
  • Community annotation for 1XR1 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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