1Y4E date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffraction, 100 Modelsresolution
ligand HSL enzyme
note 1Y4E is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural and Functional Characterization of Transmembrane Segment IV of the NHE1 Isoform of the Na+/H+ Exchanger., Slepkov ER, Rainey JK, Li X, Liu Y, Cheng FJ, Lindhout DA, Sykes BD, Fliegel L, J Biol Chem 2005 May 6;280(18):17863-72. Epub 2005 Jan 26. PMID:15677483
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (762 Kb) [Save to disk]
  • Biological Unit Coordinates (1y4e.pdb1.gz) 8 Kb
  • LPC: Ligand-Protein Contacts for 1Y4E
  • CSU: Contacts of Structural Units for 1Y4E
  • Original NMR restraints for 1Y4E from PDB
  • Retrieve 1Y4E in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1Y4E from S2C, [Save to disk]
  • View 1Y4E in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1y4e] [1y4e_A]
  • SWISS-PROT database: [P19634]
  • Belongs to the monovalent cation:proton antiporter-1 (cpa1) family according to TCDB.

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