1Y8R		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	ATP, MG, ZN	enzyme
related structures	by homologous chain: 1TGZ, 1Y8Q, 2BF8
Gene Ontology	Chain Function Process Component D, A ubiquitin activating enzyme ... enzyme activator activity E, B F, C
Primary reference	Structures of the SUMO E1 provide mechanistic insights into SUMO activation and E2 recruitment to E1., Lois LM, Lima CD, EMBO J 2005 Jan 20;. PMID:15660128

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (300 Kb) [Save to disk] Biological Unit Coordinates (1y8r.pdb1.gz) 148 Kb Biological Unit Coordinates (1y8r.pdb2.gz) 149 Kb LPC: Ligand-Protein Contacts for 1Y8R CSU: Contacts of Structural Units for 1Y8R Likely Quarternary Molecular Structure file(s) for 1Y8R Structure Factors (558 Kb) Retrieve 1Y8R in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1Y8R from S2C, [Save to disk] Re-refined 1y8r structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1Y8R in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1y8r] [1y8r_A] [1y8r_B] [1y8r_C] [1y8r_D] [1y8r_E] [1y8r_F] SWISS-PROT database: [Q9UBE0] [Q9UBT2] [P63165] Domain found in 1Y8R: [UBQ ] by SMART

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