1YFB date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
related structures by homologous chain: 1YSF
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceAbrB-like Transcription Factors Assume a Swapped Hairpin Fold that Is Evolutionarily Related to Double-Psi beta Barrels., Coles M, Djuranovic S, Soding J, Frickey T, Koretke K, Truffault V, Martin J, Lupas AN, Structure (Camb) 2005 Jun;13(6):919-28. PMID:15939023
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (35 Kb) [Save to disk]
  • Biological Unit Coordinates (1yfb.pdb1.gz) 33 Kb
  • CSU: Contacts of Structural Units for 1YFB
  • Original NMR restraints for 1YFB from PDB
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1YFB in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1YFB from S2C, [Save to disk]
  • View 1YFB in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1yfb] [1yfb_A] [1yfb_B]
  • SWISS-PROT database: [P08874]
  • Domain found in 1YFB: [SpoVT_AbrB ] by SMART

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