1YFD		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	FEO, HG	enzyme
related structures	by homologous chain: 1JPR, 1PJ0
Gene Ontology	Chain Function Process Component B, A
Primary reference	A new tyrosyl radical on Phe208 as ligand to the diiron center in Escherichia coli ribonucleotide reductase, mutant R2-Y122H. Combined x-ray diffraction and EPR/ENDOR studies., Kolberg M, Logan DT, Bleifuss G, Potsch S, Sjoberg BM, Graslund A, Lubitz W, Lassmann G, Lendzian F, J Biol Chem 2005 Mar 25;280(12):11233-46. Epub 2005 Jan 5. PMID:15634667

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (126 Kb) [Save to disk] Biological Unit Coordinates (1yfd.pdb1.gz) 119 Kb LPC: Ligand-Protein Contacts for 1YFD CSU: Contacts of Structural Units for 1YFD Likely Quarternary Molecular Structure file(s) for 1YFD Structure Factors (439 Kb) Retrieve 1YFD in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1YFD from S2C, [Save to disk] Re-refined 1yfd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1YFD in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1yfd] [1yfd_A] [1yfd_B] SWISS-PROT database: [P69924]

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