1YKI		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	CIT, DMS, FMN, NFZ	enzyme
related structures	by homologous chain: 1YLR
Gene Ontology	Chain Function Process Component A, B, C, D
Primary reference	Structural and mechanistic studies of Escherichia coli nitroreductase with the antibiotic nitrofurazone. Reversed binding orientations in different redox states of the enzyme., Race PR, Lovering AL, Green RM, Ossor A, White SA, Searle PF, Wrighton CJ, Hyde EI, J Biol Chem 2005 Apr 8;280(14):13256-64. Epub 2005 Jan 31. PMID:15684426

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (160 Kb) [Save to disk] Biological Unit Coordinates (1yki.pdb1.gz) 78 Kb Biological Unit Coordinates (1yki.pdb2.gz) 79 Kb LPC: Ligand-Protein Contacts for 1YKI CSU: Contacts of Structural Units for 1YKI Likely Quarternary Molecular Structure file(s) for 1YKI Structure Factors (700 Kb) Retrieve 1YKI in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1YKI from S2C, [Save to disk] Re-refined 1yki structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1YKI in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1yki] [1yki_A] [1yki_B] [1yki_C] [1yki_D] SWISS-PROT database: [P38489]

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---