1YNI date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand K, SUG enzyme
related structures by homologous chain: 1YNH
Gene
Ontology
ChainFunctionProcessComponent
A, C, D, B


Primary referenceCrystal structure of N-succinylarginine dihydrolase AstB, bound to substrate and product, an enzyme from the arginine catabolic pathway of Escherichia coli., Tocilj A, Schrag JD, Li Y, Schneider BL, Reitzer L, Matte A, Cygler M, J Biol Chem. 2005 Apr 22;280(16):15800-8. Epub 2005 Feb 9. PMID:15703173
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (287 Kb) [Save to disk]
  • Biological Unit Coordinates (1yni.pdb1.gz) 144 Kb
  • Biological Unit Coordinates (1yni.pdb2.gz) 142 Kb
  • LPC: Ligand-Protein Contacts for 1YNI
  • CSU: Contacts of Structural Units for 1YNI
  • Likely Quarternary Molecular Structure file(s) for 1YNI
  • Structure Factors (578 Kb)
  • Retrieve 1YNI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1YNI from S2C, [Save to disk]
  • Re-refined 1yni structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1YNI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1yni] [1yni_A] [1yni_B] [1yni_C] [1yni_D]
  • SWISS-PROT database: [P76216]

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