1YNW		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	ZN	enzyme
note	1YNW (Molecule of the Month:pdb155)
related structures	by homologous chain: 1CIT, 1KB4, 1RXR
Gene Ontology	Chain Function Process Component A B
Primary reference	Structural analysis of RXR-VDR interactions on DR3 DNA., Shaffer PL, Gewirth DT, J Steroid Biochem Mol Biol 2004 May;89-90(1-5):215-9. PMID:15225774

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (47 Kb) [Save to disk] Biological Unit Coordinates (1ynw.pdb1.gz) 42 Kb LPC: Ligand-Protein Contacts for 1YNW CSU: Contacts of Structural Units for 1YNW Likely Quarternary Molecular Structure file(s) for 1YNW Structure Factors (189 Kb) Retrieve 1YNW in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1YNW from S2C, [Save to disk] Re-refined 1ynw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1YNW in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1ynw] [1ynw_A] [1ynw_B] [1ynw_C] [1ynw_D] SWISS-PROT database: [P19793] [P11473] Belongs to the vitamin d3 receptor (vdr) family according to TCDB. Domain found in 1YNW: [ZnF_C4 ] by SMART

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