1YPM		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	RA4, TYS	enzyme
Gene Ontology	Chain Function Process Component H L
Primary reference	Design and X-ray crystal structures of human thrombin with synthetic cyanopeptide-analogues., Radau G, Fokkens J, Pharmazie. 2007 Feb;62(2):83-8. PMID:17341023

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (56 Kb) [Save to disk] Biological Unit Coordinates (1ypm.pdb1.gz) 51 Kb LPC: Ligand-Protein Contacts for 1YPM CSU: Contacts of Structural Units for 1YPM Likely Quarternary Molecular Structure file(s) for 1YPM Structure Factors (233 Kb) Retrieve 1YPM in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1YPM from S2C, [Save to disk] Re-refined 1ypm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1YPM in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1ypm] [1ypm_H] [1ypm_I] [1ypm_L] SWISS-PROT database: [P00734] Domain found in 1YPM: [Tryp_SPc ] by SMART

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