1YPQ date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand DIO enzyme
related structures by homologous chain: 1YXJ
Primary referenceThe 1.4 anstrom crystal structure of the human oxidized low density lipoprotein receptor lox-1., Park H, Adsit FG, Boyington JC, J Biol Chem 2005 Apr 8;280(14):13593-9. Epub 2005 Feb 5. PMID:15695803
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (54 Kb) [Save to disk]
  • Biological Unit Coordinates (1ypq.pdb1.gz) 50 Kb
  • LPC: Ligand-Protein Contacts for 1YPQ
  • CSU: Contacts of Structural Units for 1YPQ
  • Likely Quarternary Molecular Structure file(s) for 1YPQ
  • Structure Factors (724 Kb)
  • Retrieve 1YPQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1YPQ from S2C, [Save to disk]
  • Re-refined 1ypq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1YPQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ypq] [1ypq_A] [1ypq_B]
  • SWISS-PROT database: [P78380]
  • Domain found in 1YPQ: [CLECT ] by SMART

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