1YW2 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand PGJ BindingDB enzyme
related structures by homologous chain: 1OVE, 1YQJ
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe development of new isoxazolone based inhibitors of tumor necrosis factor-alpha (TNF-alpha) production., Laughlin SK, Clark MP, Djung JF, Golebiowski A, Brugel TA, Sabat M, Bookland RG, Laufersweiler MJ, Vanrens JC, Townes JA, De B, Hsieh LC, Xu SC, Walter RL, Mekel MJ, Janusz MJ, Bioorg Med Chem Lett 2005 May 2;15(9):2399-403. PMID:15837333
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (65 Kb) [Save to disk]
  • Biological Unit Coordinates (1yw2.pdb1.gz) 60 Kb
  • LPC: Ligand-Protein Contacts for 1YW2
  • CSU: Contacts of Structural Units for 1YW2
  • Likely Quarternary Molecular Structure file(s) for 1YW2
  • Structure Factors (258 Kb)
  • Retrieve 1YW2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1YW2 from S2C, [Save to disk]
  • Re-refined 1yw2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1YW2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1yw2] [1yw2_A]
  • SWISS-PROT database: [P47811]
  • Domain found in 1YW2: [S_TKc ] by SMART

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