1YX5 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffraction, 18 Modelsresolution
related structures by homologous chain: 1YX4, 1YX6
Primary referenceStructure of s5a bound to monoubiquitin provides a model for polyubiquitin recognition., Wang Q, Young P, Walters KJ, J Mol Biol 2005 May 6;348(3):727-39. PMID:15826667
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (842 Kb) [Save to disk]
  • Biological Unit Coordinates (1yx5.pdb1.gz) 47 Kb
  • CSU: Contacts of Structural Units for 1YX5
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1YX5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1YX5 from S2C, [Save to disk]
    • View 1YX5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1yx5] [1yx5_A] [1yx5_B]
  • SWISS-PROT database: [P55036] [P62988]
  • Domains found in 1YX5: [UBQ] [UIM ] by SMART

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