1ZRZ Transferase date May 23, 2005
title Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota
authors A.Messerschmidt, S.Macieira, M.Velarde, M.Baedeker, C.Benda, A.Jestel, H.Brandstetter, T.Neuefeind, M.Blaesse, Structural Proteomics In Europe (Spine)
compound source
Molecule: Protein Kinase C, Iota
Chain: A
Fragment: Catalytic Domain, Residues 224-587
Ec: 2.7.1.-
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Prkci
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
Expression_system_strain: Sf9 Cells
Expression_system_vector_type: Baculovirus
Expression_system_plasmid: Pfastbachta
symmetry Space Group: P 32 2 1
R_factor 0.249 R_Free 0.333
length a length b length c angle alpha angle beta angle gamma
78.143 78.143 112.625 90.00 90.00 120.00
method X-Ray Diffractionresolution 3.00 Å
ligand BI1, TPO BindingDB enzyme Transferase E.C.2.7.1 BRENDA

Primary referenceCrystal Structure of the Catalytic Domain of Human Atypical Protein Kinase C-iota Reveals Interaction Mode of Phosphorylation Site in Turn Motif., Messerschmidt A, Macieira S, Velarde M, Badeker M, Benda C, Jestel A, Brandstetter H, Neuefeind T, Blaesse M, J Mol Biol 2005 Sep 30;352(4):918-31. PMID:16125198
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (57 Kb) [Save to disk]
  • Biological Unit Coordinates (1zrz.pdb1.gz) 52 Kb
  • LPC: Ligand-Protein Contacts for 1ZRZ
  • CSU: Contacts of Structural Units for 1ZRZ
  • Likely Quarternary Molecular Structure file(s) for 1ZRZ
  • Structure Factors (314 Kb)
  • Retrieve 1ZRZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1ZRZ from S2C, [Save to disk]
  • Re-refined 1zrz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1ZRZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1ZRZ
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1ZRZ, from MSDmotif at EBI
  • Fold representative 1zrz from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1zrz_A] [1zrz]
  • SWISS-PROT database: [P41743]
  • Domain organization of [KPCI_HUMAN] by SWISSPFAM
  • Domains found in 1ZRZ: [S_TK_X] [S_TKc ] by SMART
  • Other resources with information on 1ZRZ
  • Community annotation for 1ZRZ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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