1MP7 Dna date Sep 11, 2002
title A Third Complex Of Post-Activated Neocarzinostatin Chromopho Dna. Bulge Dna Binding From The Minor Groove
authors Y.Kwon, Z.Xi, L.S.Kappen, I.H.Goldberg, X.Gao
compound source
Molecule: 5'-D(Gpcpcpapgpapgpapgpc)-3'
Chain: A
Engineered: Yes
Synthetic: Yes
methodSolution NMR
ligand NCG enzyme
Primary referenceNew complex of post-activated neocarzinostatin chromophore with DNA: bulge DNA binding from the minor groove., Kwon Y, Xi Z, Kappen LS, Goldberg IH, Gao X, Biochemistry 2003 Feb 11;42(5):1186-98. PMID:12564921
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (70 Kb) [Save to disk]
  • Biological Unit Coordinates (1mp7.pdb1.gz) 8 Kb
  • LPC: Ligand-Protein Contacts for 1MP7
  • CSU: Contacts of Structural Units for 1MP7
  • Original NMR restraints for 1MP7 from PDB
  • Retrieve 1MP7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1MP7 from S2C, [Save to disk]
  • View 1MP7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1MP7
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1MP7, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1mp7_A] [1mp7]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 1MP7
  • Community annotation for 1MP7 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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