2AC3 Transferase date Jul 18, 2005
title Structure Of Human Mnk2 Kinase Domain
authors R.Jauch, M.C.Wahl, C.Netter, S.Jakel, K.Schreiter, B.Aicher, H.Jac
compound source
Molecule: Map Kinase-Interacting Serinethreonine Kinase 2
Chain: A
Fragment: Residues 70-385
Synonym: Map Kinase Signal-Integrating Kinase 2, Mnk2
Ec: 2.7.1.37
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pgex-4t1
symmetry Space Group: P 32 2 1
R_factor 0.215 R_Free 0.254
crystal
cell
length a length b length c angle alpha angle beta angle gamma
104.502 104.502 72.351 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.10 Å
ligand ZN enzyme Transferase E.C.2.7.1.37 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structures of the Mnk2 kinase domain reveal an inhibitory conformation and a zinc binding site., Jauch R, Jakel S, Netter C, Schreiter K, Aicher B, Jackle H, Wahl MC, Structure. 2005 Oct;13(10):1559-68. PMID:16216586
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (54 Kb) [Save to disk]
  • Biological Unit Coordinates (2ac3.pdb1.gz) 49 Kb
  • LPC: Ligand-Protein Contacts for 2AC3
  • CSU: Contacts of Structural Units for 2AC3
  • Likely Quarternary Molecular Structure file(s) for 2AC3
  • Structure Factors (231 Kb)
  • Retrieve 2AC3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2AC3 from S2C, [Save to disk]
  • Re-refined 2ac3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2AC3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2AC3
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2AC3, from MSDmotif at EBI
  • Fold representative 2ac3 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ac3_A] [2ac3]
  • SWISS-PROT database: [Q9HBH9]
  • Domain organization of [MKNK2_HUMAN] by SWISSPFAM
  • Domain found in 2AC3: [S_TKc ] by SMART
  • Other resources with information on 2AC3
  • Community annotation for 2AC3 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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