2AD1 Transferase date Jul 19, 2005
title Human Sulfotransferase Sult1c2
authors A.Dong, L.Dombrovski, P.Loppnau, A.M.Edwards, C.H.Arrowsmith, J.Weigelt, M.Sundstrom, A.Bochkarev, A.N.Plotnikov, Structural Genomics Consortium (Sgc)
compound source
Molecule: Sulfotransferase 1c2
Chain: A
Synonym: Sult1c2; Sult1c#2
Ec: 2.8.2.-
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Sult1c2
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28
symmetry Space Group: P 32 2 1
R_factor 0.218 R_Free 0.262
crystal
cell
length a length b length c angle alpha angle beta angle gamma
58.824 58.824 189.287 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.00 Å
ligand
enzyme Transferase E.C.2.8.2 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural and chemical profiling of the human cytosolic sulfotransferases., Allali-Hassani A, Pan PW, Dombrovski L, Najmanovich R, Tempel W, Dong A, Loppnau P, Martin F, Thornton J, Edwards AM, Bochkarev A, Plotnikov AN, Vedadi M, Arrowsmith CH, PLoS Biol. 2007 May;5(5):e97. PMID:17425406
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (49 Kb) [Save to disk]
  • Biological Unit Coordinates (2ad1.pdb1.gz) 45 Kb
  • CSU: Contacts of Structural Units for 2AD1
  • Likely Quarternary Molecular Structure file(s) for 2AD1
  • Structure Factors (179 Kb)
  • Retrieve 2AD1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2AD1 from S2C, [Save to disk]
  • Re-refined 2ad1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2AD1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2AD1
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2AD1, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1v2ad1, region D:84-208 [Jmol] [rasmolscript] [script source]
  • Fold representative 2ad1 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ad1] [2ad1_A]
  • SWISS-PROT database: [O75897]
  • Domain organization of [ST1C4_HUMAN] by SWISSPFAM
  • Other resources with information on 2AD1
  • Community annotation for 2AD1 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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