2AW5 Oxidoreductase date Aug 31, 2005
title Crystal Structure Of A Human Malic Enzyme
authors E.Papagrigoriou, G.Berridge, C.Smee, J.Bray, C.Arrowsmith, A.Edwards, J.Weigelt, M.Sundstrom, U.Oppermann, O.Gileadi, F.Von Delft, Structural Genomics Consortium (Sgc)
compound source
Molecule: Nadp-Dependent Malic Enzyme
Chain: A, B, C
Fragment: Residues 15-555
Synonym: Me1, Nadp-Me, Malic Enzyme 1
Ec: 1.1.1.40
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21de3 R3
symmetry Space Group: C 1 2 1
R_factor 0.207 R_Free 0.256
crystal
cell
length a length b length c angle alpha angle beta angle gamma
152.505 136.963 117.840 90.00 121.75 90.00
method X-Ray Diffractionresolution 2.50 Å
ligand
enzyme Oxidoreductase E.C.1.1.1.40 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, C, B
  • electron transfer activity


  • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (247 Kb) [Save to disk]
  • Biological Unit Coordinates (2aw5.pdb1.gz) 162 Kb
  • Biological Unit Coordinates (2aw5.pdb2.gz) 160 Kb
  • CSU: Contacts of Structural Units for 2AW5
  • Likely Quarternary Molecular Structure file(s) for 2AW5
  • Structure Factors (499 Kb)
  • Retrieve 2AW5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2AW5 from S2C, [Save to disk]
  • Re-refined 2aw5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2AW5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2AW5
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2AW5, from MSDmotif at EBI
  • Fold representative 2aw5 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2aw5_C] [2aw5_B] [2aw5] [2aw5_A]
  • SWISS-PROT database: [P48163]
  • Domain organization of [MAOX_HUMAN] by SWISSPFAM
  • Domains found in 2AW5: [Malic_M] [malic ] by SMART
  • Other resources with information on 2AW5
  • Community annotation for 2AW5 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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