2AWG Signaling Protein Inhibitor date Sep 01, 2005
title Structure Of The Ppiase Domain Of The Human Fk506-Binding Protein 8
authors J.R.Walker, T.Davis, E.M.Newman, P.Finerty, F.Mackenzie, J.Weigelt, M.Sundstrom, C.Arrowsmith, A.Edwards, A.Bochkarev, S.Dhe-Paganon, Structural Genomics Consortium (Sgc)
compound source
Molecule: 38 Kda Fk-506 Binding Protein
Chain: A
Fragment: Fkbp-Type Ppiase Domain, Residues 90-205
Synonym: Fkbpr38, Fk506-Binding Protein 8
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Fkbp8, Fkbp38
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21 (De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28-Lic
symmetry Space Group: P 1 21 1
R_factor 0.167 R_Free 0.202
crystal
cell
length a length b length c angle alpha angle beta angle gamma
30.911 53.795 30.640 90.00 92.43 90.00
method X-Ray Diffractionresolution 1.60 Å
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (24 Kb) [Save to disk]
  • Biological Unit Coordinates (2awg.pdb1.gz) 21 Kb
  • CSU: Contacts of Structural Units for 2AWG
  • Likely Quarternary Molecular Structure file(s) for 2AWG
  • Structure Factors (82 Kb)
  • Retrieve 2AWG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2AWG from S2C, [Save to disk]
  • Re-refined 2awg structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2AWG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2AWG
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2AWG, from MSDmotif at EBI
  • Fold representative 2awg from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2awg] [2awg_A]
  • SWISS-PROT database: [Q14318]
  • Domain organization of [FKBP8_HUMAN] by SWISSPFAM
  • Other resources with information on 2AWG
  • Community annotation for 2AWG at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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