2BKD Structure of the N-terminal domain of Fragile X Mental Retardation Protein date
authors Ramos, A., Hollingworth, D., Adinolfi, S., Castets, M., Kelly, G., Frenkiel, T.A., Bardoni, B., Pastore, A.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffraction, 20 Modelsresolution
ligand HSO enzyme
Gene
Ontology
ChainFunctionProcessComponent
N


Primary referenceThe structure of the N-terminal domain of the fragile X mental retardation protein: a platform for protein-protein interaction., Ramos A, Hollingworth D, Adinolfi S, Castets M, Kelly G, Frenkiel TA, Bardoni B, Pastore A, Structure. 2006 Jan;14(1):21-31. PMID:16407062
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (703 Kb) [Save to disk]
  • Biological Unit Coordinates (2bkd.pdb1.gz) 36 Kb
  • LPC: Ligand-Protein Contacts for 2BKD
  • CSU: Contacts of Structural Units for 2BKD
  • Retrieve 2BKD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2BKD from S2C, [Save to disk]
    • View 2BKD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2BKD
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2BKD, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2bkd_N] [2bkd]
  • SWISS-PROT database: [Q06787]
  • Domain organization of [FMR1_HUMAN] by SWISSPFAM
    • Other resources with information on 2BKD
  • Community annotation for 2BKD at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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