2CP6 Protein Binding date May 19, 2005
title Solution Structure Of The 2nd Cap-Gly Domain In Human Clip-1
authors K.Saito, S.Koshiba, M.Inoue, T.Kigawa, S.Yokoyama, Riken Structur Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Restin
Chain: A
Fragment: Cap-Gly Domain
Synonym: Cytoplasmic Linker Protein-170 Alpha-2, Clip-170, Sternberg Intermediate Filament Associated Protein;
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Fb2383_d01
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P040816-06
Other_details: Cell-Free Protein Synthesis
methodSolution NMR
Gene FB2383
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (836 Kb) [Save to disk]
  • Biological Unit Coordinates (2cp6.pdb1.gz) 41 Kb
  • CSU: Contacts of Structural Units for 2CP6
  • Retrieve 2CP6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2CP6 from S2C, [Save to disk]
    • View 2CP6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2CP6
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2CP6, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2cp6_A] [2cp6]
  • SWISS-PROT database: [P30622]
  • Domain organization of [CLIP1_HUMAN] by SWISSPFAM
  • Domain found in 2CP6: [CAP_GLY ] by SMART
    • Other resources with information on 2CP6
  • Community annotation for 2CP6 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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