2CUB Signaling Protein date May 26, 2005
title Solution Structure Of The Sh3 Domain Of The Human Cytoplasmic Protein Nck1
authors S.Ohnishi, T.Kigawa, M.Sato, T.Tomizawa, S.Koshiba, M.Inoue, S.Yokoyama, Riken Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Cytoplasmic Protein Nck1
Chain: A
Fragment: Sh3 Domain
Synonym: Nck Adaptor Protein 1, Sh2sh3 Adaptor Protein Nck-Alpha;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Nck1
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P040621-03
Other_details: Cell-Free Protein Synthesis
methodSolution NMR
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (431 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 2CUB
  • Retrieve 2CUB in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2CUB from S2C, [Save to disk]
  • View 2CUB in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2CUB
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2CUB, from MSDmotif at EBI
  • Fold representative 2cub from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2cub] [2cub_A]
  • SWISS-PROT database: [P16333]
  • Domain organization of [NCK1_HUMAN] by SWISSPFAM
  • Domain found in 2CUB: [SH3 ] by SMART
  • Other resources with information on 2CUB
  • Community annotation for 2CUB at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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