OCA Atlas for 2D1X

2D1X

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

SO4

enzyme

Gene
Ontology

Chain	Function	Process	Component
D, A, B, C

Primary reference

Targeting AMAP1 and cortactin binding bearing an atypical src homology 3/proline interface for prevention of breast cancer invasion and metastasis., Hashimoto S, Hirose M, Hashimoto A, Morishige M, Yamada A, Hosaka H, Akagi K, Ogawa E, Oneyama C, Agatsuma T, Okada M, Kobayashi H, Wada H, Nakano H, Ikegami T, Nakagawa A, Sabe H, Proc Natl Acad Sci U S A. 2006 May 2;103(18):7036-41. Epub 2006 Apr 24. PMID:16636290

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (51 Kb) [Save to disk]

Biological Unit Coordinates (2d1x.pdb1.gz) 24 Kb

Biological Unit Coordinates (2d1x.pdb2.gz) 24 Kb

LPC: Ligand-Protein Contacts for 2D1X

CSU: Contacts of Structural Units for 2D1X

Likely Quarternary Molecular Structure file(s) for 2D1X

Structure Factors (153 Kb)

Retrieve 2D1X in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 2D1X from S2C, [Save to disk]

Re-refined 2d1x structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2D1X in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2d1x] [2d1x_A] [2d1x_B] [2d1x_C] [2d1x_D] [2d1x_P] [2d1x_Q]

SWISS-PROT database: [Q14247]

Domain found in 2D1X: [SH3 ] by SMART

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