2DQM date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand BES, SO4, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal Structure of Aminopeptidase N (Proteobacteria Alanyl Aminopeptidase) from Escherichia coli and Conformational Change of Methionine 260 Involved in Substrate Recognition., Ito K, Nakajima Y, Onohara Y, Takeo M, Nakashima K, Matsubara F, Ito T, Yoshimoto T, J Biol Chem. 2006 Nov 3;281(44):33664-76. Epub 2006 Aug 2. PMID:16885166
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (160 Kb) [Save to disk]
  • Biological Unit Coordinates (2dqm.pdb1.gz) 155 Kb
  • LPC: Ligand-Protein Contacts for 2DQM
  • CSU: Contacts of Structural Units for 2DQM
  • Likely Quarternary Molecular Structure file(s) for 2DQM
  • Structure Factors (6211 Kb)
  • Retrieve 2DQM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2DQM from S2C, [Save to disk]
  • Re-refined 2dqm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2DQM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2dqm] [2dqm_A]
  • SWISS-PROT database: [P04825]

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science