2F5B date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
related structures by homologous chain: 1D6V, 1U8I, 1YY8
Primary referenceCrystallographic definition of the epitope promiscuity of the broadly neutralizing anti-human immunodeficiency virus type 1 antibody 2F5: vaccine design implications., Bryson S, Julien JP, Hynes RC, Pai EF, J Virol. 2009 Nov;83(22):11862-75. Epub 2009 Sep 9. PMID:19740978
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (80 Kb) [Save to disk]
  • Biological Unit Coordinates (2f5b.pdb1.gz) 75 Kb
  • CSU: Contacts of Structural Units for 2F5B
  • Likely Quarternary Molecular Structure file(s) for 2F5B
  • Structure Factors (701 Kb)
  • Retrieve 2F5B in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2F5B from S2C, [Save to disk]
  • Re-refined 2f5b structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2F5B in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2f5b] [2f5b_H] [2f5b_L] [2f5b_P]
  • SWISS-PROT database:
  • Domains found in 2F5B: [IG_like] [IGv ] by SMART

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