2FAU	Protein Transport	date	Dec 08, 2005
title	Crystal Structure Of Human Vps26
authors	H.Shi, R.Rojas, J.S.Bonifacino, J.H.Hurley
compound		source
Molecule: Vacuolar Protein Sorting 26 Chain: A Synonym: Vesicle Protein Sorting 26, Hvps26 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Vps26a, Vps26 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21 (De3) Gold Expression_system_vector_type: Plasmid Expression_system_plasmid: Pmr101
symmetry	Space Group: P 21 21 21	R_factor 0.235 R_Free 0.284
crystal cell	length a length b length c angle alpha angle beta angle gamma 40.964 76.368 126.491 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.10 Å
ligand	CAF, GOL	enzyme
note	2FAU is a representative structure
Gene Ontology	Chain Function Process Component A
Primary reference	The retromer subunit Vps26 has an arrestin fold and binds Vps35 through its C-terminal domain., Shi H, Rojas R, Bonifacino JS, Hurley JH, Nat Struct Mol Biol. 2006 Jun;13(6):540-548. Epub 2006 May 28. PMID:16732284

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (56 Kb) [Save to disk] Biological Unit Coordinates (2fau.pdb1.gz) 51 Kb LPC: Ligand-Protein Contacts for 2FAU CSU: Contacts of Structural Units for 2FAU Likely Quarternary Molecular Structure file(s) for 2FAU Structure Factors (328 Kb) Retrieve 2FAU in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2FAU from S2C, [Save to disk] Re-refined 2fau structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2FAU in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2FAU

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2FAU, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2fau] [2fau_A] SWISS-PROT database: [O75436] Domain organization of [VP26A_HUMAN] by SWISSPFAM

Other resources with information on 2FAU

Community annotation for 2FAU at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---