2FEI Structural Protein date Dec 15, 2005
title Solution Structure Of The Second Sh3 Domain Of Human Cms Protein
authors B.Yao, H.Dai, Y.Jiao, J.Wu, Y.Shi
compound source
Molecule: Cd2-Associated Protein
Chain: A
Fragment: The Second Sh3 Domain
Synonym: Cas Ligand With Multiple Sh3 Domains, Adapter Protein Cms;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Cms
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet22b(+)
methodSolution NMR
Primary referenceSolution structure of the second SH3 domain of human CMS and a newly identified binding site at the C-terminus of c-Cbl., Yao B, Zhang J, Dai H, Sun J, Jiao Y, Tang Y, Wu J, Shi Y, Biochim Biophys Acta. 2007 Jan;1774(1):35-43. Epub 2006 Oct 27. PMID:17188587
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (328 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 2FEI
  • Original NMR restraints for 2FEI from PDB
  • Retrieve 2FEI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2FEI from S2C, [Save to disk]
  • View 2FEI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2FEI
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2FEI, from MSDmotif at EBI
  • Fold representative 2fei from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2fei] [2fei_A]
  • SWISS-PROT database: [Q9Y5K6]
  • Domain organization of [CD2AP_HUMAN] by SWISSPFAM
  • Domain found in 2FEI: [SH3 ] by SMART
  • Other resources with information on 2FEI
  • Community annotation for 2FEI at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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