2FK9 Transferase date Jan 04, 2006
title Human Protein Kinase C, Eta
authors J.R.Walker, D.R.Littler, P.J.Finerty Jr., F.Mackenzie, E.M.Newma J.Weigelt, M.Sundstrom, C.Arrowsmith, A.Edwards, A.Bochkarev, S. Paganon, Structural Genomics Consortium (Sgc)
compound source
Molecule: Protein Kinase C, Eta Type
Chain: A
Fragment: C2 Domain (Residues 1-138)
Ec: 2.7.1.37
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Prkch
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28-Lic
symmetry Space Group: P 21 21 21
R_factor 0.178 R_Free 0.215
crystal
cell
length a length b length c angle alpha angle beta angle gamma
45.007 49.404 67.508 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.75 Å
ligand
enzyme Transferase E.C.2.7.1.37 BRENDA
Primary referenceStructure of human protein kinase C eta (PKCeta) C2 domain and identification of phosphorylation sites., Littler DR, Walker JR, She YM, Finerty PJ Jr, Newman EM, Dhe-Paganon S, Biochem Biophys Res Commun. 2006 Nov 3;349(4):1182-9. Epub 2006 Sep 5. PMID:16973127
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (33 Kb) [Save to disk]
  • Biological Unit Coordinates (2fk9.pdb1.gz) 26 Kb
  • CSU: Contacts of Structural Units for 2FK9
  • Likely Quarternary Molecular Structure file(s) for 2FK9
  • Structure Factors (108 Kb)
  • Retrieve 2FK9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2FK9 from S2C, [Save to disk]
  • Re-refined 2fk9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2FK9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2FK9
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2FK9, from MSDmotif at EBI
  • Fold representative 2fk9 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2fk9] [2fk9_A]
  • SWISS-PROT database: [P24723]
  • Domain organization of [KPCL_HUMAN] by SWISSPFAM
  • Domain found in 2FK9: [C2 ] by SMART
  • Other resources with information on 2FK9
  • Community annotation for 2FK9 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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