2G0B Transferase date Feb 11, 2006
title The Structure Of Feem, An N-Acyl Amino Acid Synthase From Un Soil Microbes
authors R.M.Van Wagoner, J.Clardy
compound source
Molecule: Feem
Chain: A, B, C, D, E, F, G, H
Ec: 2.3.1.-
Engineered: Yes
 Organism_scientific: Uncultured Bacterium
Organism_taxid: 77133
Gene: Feem
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet42
symmetry Space Group: I 41 2 2
R_factor 0.255 R_Free 0.292
crystal
cell
length a length b length c angle alpha angle beta angle gamma
182.832 182.832 287.429 90.00 90.00 90.00
method X-Ray Diffractionresolution 3.00 Å
ligand NLT enzyme Transferase E.C.2.3.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
F, A, E, B, H, C, D, G


Primary referenceFeeM, an N-Acyl Amino Acid Synthase from an Uncultured Soil Microbe: Structure, Mechanism, and Acyl Carrier Protein Binding., Van Wagoner RM, Clardy J, Structure. 2006 Sep;14(9):1425-35. PMID:16962973
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (225 Kb) [Save to disk]
  • Biological Unit Coordinates (2g0b.pdb1.gz) 32 Kb
  • Biological Unit Coordinates (2g0b.pdb2.gz) 31 Kb
  • Biological Unit Coordinates (2g0b.pdb3.gz) 31 Kb
  • Biological Unit Coordinates (2g0b.pdb4.gz) 30 Kb
  • Biological Unit Coordinates (2g0b.pdb5.gz) 30 Kb
  • Biological Unit Coordinates (2g0b.pdb6.gz) 31 Kb
  • Biological Unit Coordinates (2g0b.pdb7.gz) 29 Kb
  • Biological Unit Coordinates (2g0b.pdb8.gz) 29 Kb
  • Biological Unit Coordinates (2g0b.pdb9.gz) 115 Kb
  • LPC: Ligand-Protein Contacts for 2G0B
  • CSU: Contacts of Structural Units for 2G0B
  • Likely Quarternary Molecular Structure file(s) for 2G0B
  • Structure Factors (2993 Kb)
  • Retrieve 2G0B in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2G0B from S2C, [Save to disk]
  • Re-refined 2g0b structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2G0B in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2G0B
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2G0B, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2g0b_D] [2g0b] [2g0b_G] [2g0b_C] [2g0b_H] [2g0b_A] [2g0b_F] [2g0b_B] [2g0b_E]
  • SWISS-PROT database: [Q8KNZ7]
  • Domain organization of [Q8KNZ7_9BACT] by SWISSPFAM
    • Other resources with information on 2G0B
  • Community annotation for 2G0B at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science