2GPQ Translation date Apr 18, 2006
title Cap-Free Structure Of Eif4e Suggests Basis For Its Allosteric Regulation
authors L.Volpon, M.J.Osborne, K.L.B.Borden
compound source
Molecule: Eukaryotic Translation Initiation Factor 4e
Chain: A
Synonym: Eif4e, Eif-4e, Mrna Cap-Binding Protein, Eif-4f 25 Kda Subunit
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCap-free structure of eIF4E suggests a basis for conformational regulation by its ligands., Volpon L, Osborne MJ, Topisirovic I, Siddiqui N, Borden KL, EMBO J. 2006 Nov 1;25(21):5138-49. Epub 2006 Oct 12. PMID:17036047
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (590 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 2GPQ
  • Original NMR restraints for 2GPQ from PDB
  • Retrieve 2GPQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2GPQ from S2C, [Save to disk]
  • View 2GPQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2GPQ
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2GPQ, from MSDmotif at EBI
  • Fold representative 2gpq from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2gpq_A] [2gpq]
  • SWISS-PROT database: [P06730]
  • Domain organization of [IF4E_HUMAN] by SWISSPFAM
  • Other resources with information on 2GPQ
  • Community annotation for 2GPQ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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