2HGS Amine Carboxylate Ligase date Jan 04, 1999
title Human Glutathione Synthetase
authors G.Polekhina, P.Board, J.Rossjohn, M.W.Parker
compound source
Molecule: Protein (Glutathione Synthetase)
Chain: A
Ec: 6.3.2.3
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Organ: Brain
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Tg1
Expression_system_plasmid: Prg1
Other_details: Cdna
symmetry Space Group: P 41 2 2
R_factor 0.218 R_Free 0.281
crystal
cell
length a length b length c angle alpha angle beta angle gamma
84.260 84.260 197.620 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.10 Å
ligand ADP, GSH, MG, SO4 enzyme Ligase E.C.6.3.2.3 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceMolecular basis of glutathione synthetase deficiency and a rare gene permutation event., Polekhina G, Board PG, Gali RR, Rossjohn J, Parker MW, EMBO J 1999 Jun 15;18(12):3204-13. PMID:10369661
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (86 Kb) [Save to disk]
  • Biological Unit Coordinates (2hgs.pdb1.gz) 160 Kb
  • LPC: Ligand-Protein Contacts for 2HGS
  • CSU: Contacts of Structural Units for 2HGS
  • Likely Quarternary Molecular Structure file(s) for 2HGS
  • Retrieve 2HGS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2HGS from S2C, [Save to disk]
  • View 2HGS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2HGS
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2HGS, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d2hgsa1, region A:202-303 [Jmol] [rasmolscript] [script source]
        - Domain d2hgsa4, region A:3-201,A:304-474 [Jmol] [rasmolscript] [script source]
  • Fold representative 2hgs from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2hgs_A] [2hgs]
  • SWISS-PROT database: [P48637]
  • Domain organization of [GSHB_HUMAN] by SWISSPFAM
  • Other resources with information on 2HGS
  • Community annotation for 2HGS at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Domain movements in 2HGS from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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