2HQT Crystal structures of the interacting domains from yeast glutamyl-tRNA synthetase and tRNA aminoacylation and nuclear export cofactor Arc1p reveal a novel function for an old fold date
authors Simader, H., Hothorn, M., Suck, D.
compound source
symmetry
R_factor
R_Free 0.26239
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.90
ligand SO4 enzyme
note 2HQT is a representative structure
Primary referenceStructures of the interacting domains from yeast glutamyl-tRNA synthetase and tRNA-aminoacylation and nuclear-export cofactor Arc1p reveal a novel function for an old fold., Simader H, Hothorn M, Suck D, Acta Crystallogr D Biol Crystallogr. 2006 Dec;62(Pt 12):1510-9. Epub 2006, Nov 23. PMID:17139087
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (407 Kb) [Save to disk]
  • Biological Unit Coordinates (2hqt.pdb1.gz) 23 Kb
  • Biological Unit Coordinates (2hqt.pdb2.gz) 25 Kb
  • Biological Unit Coordinates (2hqt.pdb3.gz) 22 Kb
  • Biological Unit Coordinates (2hqt.pdb4.gz) 25 Kb
  • Biological Unit Coordinates (2hqt.pdb5.gz) 23 Kb
  • Biological Unit Coordinates (2hqt.pdb6.gz) 24 Kb
  • Biological Unit Coordinates (2hqt.pdb7.gz) 24 Kb
  • Biological Unit Coordinates (2hqt.pdb8.gz) 22 Kb
  • Biological Unit Coordinates (2hqt.pdb9.gz) 23 Kb
  • LPC: Ligand-Protein Contacts for 2HQT
  • CSU: Contacts of Structural Units for 2HQT
  • Likely Quarternary Molecular Structure file(s) for 2HQT
  • Structure Factors (2853 Kb)
  • Retrieve 2HQT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2HQT from S2C, [Save to disk]
  • Re-refined 2hqt structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2HQT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2HQT
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2HQT, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2hqt_C] [2hqt_Q] [2hqt_P] [2hqt_D] [2hqt_B] [2hqt_E] [2hqt_S] [2hqt_I] [2hqt_L] [2hqt_O] [2hqt_G] [2hqt_M] [2hqt_T] [2hqt] [2hqt_J] [2hqt_N] [2hqt_R] [2hqt_K] [2hqt_F] [2hqt_A] [2hqt_H]
  • SWISS-PROT database: [P46672]
  • Domain organization of [G4P1_YEAST] by SWISSPFAM
    • Other resources with information on 2HQT
  • Community annotation for 2HQT at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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