2JW4 Signaling Protein date Oct 05, 2007
title Nmr Solution Structure Of The N-Terminal Sh3 Domain Of Human Nckalpha
authors C.M.Santiveri, A.Borroto, L.Simon, M.Rico, A.R.Ortiz, B.Alarcon, M.Jimenez
compound source
Molecule: Cytoplasmic Protein Nck1
Chain: A
Fragment: Sh3 1 Domain, Sequence Database Residues 1-63
Synonym: Nck Adaptor Protein 1, Sh2sh3 Adaptor Protein Nck-Alpha;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Nck1, Nck
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Vector
Expression_system_vector: Pgex4t
methodSolution NMR
Primary referenceInteraction between the N-terminal SH3 domain of Nckalpha and CD3varepsilon-derived peptides: Non-canonical and canonical recognition motifs., Santiveri CM, Borroto A, Simon L, Rico M, Alarcon B, Jimenez MA, Biochim Biophys Acta. 2009 Jan;1794(1):110-7. Epub 2008 Oct 10. PMID:18955169
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (451 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 2JW4
  • Original NMR restraints for 2JW4 from PDB
  • Retrieve 2JW4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2JW4 from S2C, [Save to disk]
  • View 2JW4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2JW4
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2JW4, from MSDmotif at EBI
  • Fold representative 2jw4 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2jw4_A] [2jw4]
  • SWISS-PROT database: [P16333]
  • Domain organization of [NCK1_HUMAN] by SWISSPFAM
  • Domain found in 2JW4: [SH3 ] by SMART
  • Other resources with information on 2JW4
  • Community annotation for 2JW4 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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