2K2C Metal Binding Protein date Mar 31, 2008
title Solution Nmr Structure Of N-Terminal Domain Of Human Pirh2. Structural Genomics Consortium (Nesg) Target Ht2a
authors B.Wu, A.Lemak, Y.Sheng, M.Karra, S.Srisailam, M.Sunnerhagen, C.H.Arrowsmith, Northeast Structural Genomics Consortium (Ne
compound source
Molecule: Ring Finger And Chy Zinc Finger Domain-Containing 1;
Chain: A
Fragment: N-Terminal Domain: Residues 1-137
Synonym: Zinc Finger Protein 363, Ch-Rich-Interacting Match Plag1, Androgen Receptor N-Terminal-Interacting Protein, P5 Ring-H2 Protein, Hpirh2, Ring Finger Protein 199;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Rchy1, Arnip, Chimp, Pirh2, Rnf199, Znf363
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
methodSolution NMR
ligand ZN enzyme
note 2K2C is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceMolecular basis of Pirh2-mediated p53 ubiquitylation., Sheng Y, Laister RC, Lemak A, Wu B, Tai E, Duan S, Lukin J, Sunnerhagen M, Srisailam S, Karra M, Benchimol S, Arrowsmith CH, Nat Struct Mol Biol. 2008 Dec;15(12):1334-42. Epub 2008 Nov 30. PMID:19043414
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (541 Kb) [Save to disk]
  • Biological Unit Coordinates (2k2c.pdb1.gz) 37 Kb
  • LPC: Ligand-Protein Contacts for 2K2C
  • CSU: Contacts of Structural Units for 2K2C
  • Original NMR restraints for 2K2C from PDB
  • Retrieve 2K2C in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2K2C from S2C, [Save to disk]
  • View 2K2C in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2K2C
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2K2C, from MSDmotif at EBI
  • Fold representative 2k2c from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2k2c] [2k2c_A]
  • SWISS-PROT database: [Q96PM5]
  • Domain organization of [ZN363_HUMAN] by SWISSPFAM
  • Domain found in 2K2C: [ZnF_C2HC ] by SMART
  • Other resources with information on 2K2C
  • Community annotation for 2K2C at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014
    Bioinformatics Unit
    Weizmann Institute of Science