2KBW Apoptosis date Dec 09, 2008
title Solution Structure Of Human Mcl-1 Complexed With Human Bid_b
authors Q.Liu, T.Moldoveanu, T.Sprules, E.Matta-Camacho, N.Mansur-Azzam,
compound source
Molecule: Induced Myeloid Leukemia Cell Differentiation Pro 1;
Chain: A
Fragment: Residues 167-326
Synonym: Bcl-2-Related Protein Eatmcl1, Mcl1eat
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Mcl1, Myeloid Cell Leukemia 1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21
Expression_system_vector: Pet32a

Molecule: Bh3-Interacting Domain Death Agonist
Chain: B
Fragment: Bh3 Motif, Residues 76-106
Synonym: P22 Bid, Bid, Bh3-Interacting Domain Death Agonist Bid, Bh3-Interacting Domain Death Agonist P13, P13 Bid, Bh3 Interacting Domain Death Agonist P11, P11 Bid;
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Bid
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21
Expression_system_vector: Pgex-6p1
methodSolution NMR
note 2KBW is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
A


B


Primary referenceApoptotic regulation by MCL-1 through hetero-dimerization., Liu Q, Moldoveanu T, Sprules T, Matta-Camacho E, Mansur-Azzam N, Gehring K, J Biol Chem. 2010 Apr 14. PMID:20392693
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (518 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 2KBW
  • Original NMR restraints for 2KBW from PDB
  • Retrieve 2KBW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2KBW from S2C, [Save to disk]
  • View 2KBW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2KBW
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2KBW, from MSDmotif at EBI
  • Fold representative 2kbw from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2kbw_B] [2kbw_A] [2kbw]
  • SWISS-PROT database: [P55957] [Q07820]
  • Domain organization of [BID_HUMAN] [MCL1_HUMAN] by SWISSPFAM
  • Domain found in 2KBW: [BCL ] by SMART
  • Other resources with information on 2KBW
  • Community annotation for 2KBW at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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