2KKW Lipid Binding Protein date Jun 29, 2009
title Slas-Micelle Bound Alpha-Synuclein
authors J.Rao, C.C.Jao, B.Hegde, R.Langen, T.S.Ulmer
compound source
Molecule: Alpha-Synuclein
Chain: A
Synonym: Non-A Beta Component Of Ad Amyloid, Non-A4 Compone Amyloid Precursor, Nacp;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Snca, Nacp, Park1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-42
methodSolution NMR; Epr
  • cysteine-type endopeptidase ...
  • excitatory postsynaptic pote...
  • positive regulation of gluta...

  • Primary referenceA combinatorial NMR and EPR approach for evaluating the structural ensemble of partially folded proteins., Rao JN, Jao CC, Hegde BG, Langen R, Ulmer TS, J Am Chem Soc. 2010 Jun 30;132(25):8657-68. PMID:20524659
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1165 Kb) [Save to disk]
  • Biological Unit Coordinates (2kkw.pdb1.gz) 35 Kb
  • CSU: Contacts of Structural Units for 2KKW
  • Original NMR restraints for 2KKW from PDB
  • Retrieve 2KKW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2KKW from S2C, [Save to disk]
  • View 2KKW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2KKW
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2KKW, from MSDmotif at EBI
  • Fold representative 2kkw from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2kkw_A] [2kkw]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 2KKW
  • Community annotation for 2KKW at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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