2KW6 Cell Cycle date Mar 31, 2010
title Solution Nmr Structure Of Cyclin-Dependent Kinase 2-Associat (Cdk2-Associated Protein 1; Oral Cancer Suppressor Delete Cancer 1, Doc-1) From H.Sapiens, Northeast Structural Genom Consortium Target Target Hr3057h
authors A.Ertekin, J.M.Aramini, P.Rossi, A.B.Lee, M.Jiang, C.T.Ciccosanti G.V.T.Swapna, B.Rost, J.K.Everett, T.B.Acton, J.H.Prestegard, G.T.Montelione, Northeast Structural Genomics Consortium (Ne
compound source
Molecule: Cyclin-Dependent Kinase 2-Associated Protein 1
Chain: A, B
Fragment: Sequence Database Residues 61-115
Synonym: Cdk2-Associated Protein 1, Putative Oral Cancer Su Deleted In Oral Cancer 1, Doc-1;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Cdk2ap1, Cdkap1, Doc1
Expression_system: Escherichia Coli
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector: Pet21
methodSolution NMR
note 2KW6 is a representative structure
Primary referenceHuman cyclin-dependent kinase 2-associated protein 1 (CDK2AP1) is dimeric in its disulfide-reduced state, with natively disordered N-terminal region., Ertekin A, Aramini JM, Rossi P, Leonard PG, Janjua H, Xiao R, Maglaqui M, Lee HW, Prestegard JH, Montelione GT, J Biol Chem. 2012 May 11;287(20):16541-9. Epub 2012 Mar 14. PMID:22427660
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (706 Kb) [Save to disk]
  • Biological Unit Coordinates (2kw6.pdb1.gz) 36 Kb
  • CSU: Contacts of Structural Units for 2KW6
  • Original NMR restraints for 2KW6 from PDB
  • Retrieve 2KW6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2KW6 from S2C, [Save to disk]
  • View 2KW6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2KW6
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2KW6, from MSDmotif at EBI
  • Fold representative 2kw6 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2kw6_A] [2kw6_B] [2kw6]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 2KW6
  • Community annotation for 2KW6 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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