2L34 Protein Binding date Sep 06, 2010
title Structure Of The Dap12 Transmembrane Homodimer
authors M.E.Call, K.W.Wucherpfennig, J.J.Chou
compound source
Molecule: Tyro Protein Tyrosine Kinase-Binding Protein
Chain: A, B
Fragment: Unp Residues 35-67
Synonym: Dnax-Activation Protein 12, Killer-Activating Rece Associated Protein, Kar-Associated Protein;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Tyrobp, Dap12, Karap
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Vector
Expression_system_vector: Trple
methodSolution NMR
Primary referenceThe structural basis for intramembrane assembly of an activating immunoreceptor complex., Call ME, Wucherpfennig KW, Chou JJ, Nat Immunol. 2010 Nov;11(11):1023-9. Epub 2010 Oct 3. PMID:20890284
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (249 Kb) [Save to disk]
  • Biological Unit Coordinates (2l34.pdb1.gz) 17 Kb
  • CSU: Contacts of Structural Units for 2L34
  • Original NMR restraints for 2L34 from PDB
  • Retrieve 2L34 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2L34 from S2C, [Save to disk]
  • View 2L34 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2L34
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2L34, from MSDmotif at EBI
  • Fold representative 2l34 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2l34_B] [2l34] [2l34_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 2L34
  • Community annotation for 2L34 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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