2LE4 Transcription date Jun 06, 2011
title Solution Structure Of The Hmg Box Dna-Binding Domain Of Huma Cell Transcription Factor Sox2
authors S.C.Sahu, J.L.Markley, M.Tonelli, A.Bahrami, H.R.Eghbalnia, Cente Eukaryotic Structural Genomics (Cesg)
compound source
Molecule: Transcription Factor Sox-2
Chain: A
Fragment: Hmg Box Dna Binding Residues 39-118
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Sox2
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector: Peu-His
methodSolution NMR
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (477 Kb) [Save to disk]
  • Biological Unit Coordinates (2le4.pdb1.gz) 24 Kb
  • CSU: Contacts of Structural Units for 2LE4
  • Original NMR restraints for 2LE4 from PDB
  • Retrieve 2LE4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2LE4 from S2C, [Save to disk]
  • View 2LE4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2LE4
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2LE4, from MSDmotif at EBI
  • Fold representative 2le4 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2le4_A] [2le4]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2LE4: [HMG ] by SMART
  • Other resources with information on 2LE4
  • Community annotation for 2LE4 at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014
    Bioinformatics Unit
    Weizmann Institute of Science