2M5I Membrane Protein date Feb 25, 2013
title Nmr Structures Of Human Apoptotic Protein Tbid In Lppg Micel
authors Y.Wang, N.Tjandra
compound source
Molecule: Bh3-Interacting Domain Death Agonist
Chain: A
Synonym: P22 Bid, Bid, Bh3-Interacting Domain Death Agonist Bid, Bh3-Interacting Domain Death Agonist P13, P13 Bid, Bh3 Interacting Domain Death Agonist P11, P11 Bid;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Bid
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet15b
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural insights of tBid, the caspase-8 activated Bid, and its BH3 domain., Wang Y, Tjandra N, J Biol Chem. 2013 Oct 24. PMID:24158446
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (729 Kb) [Save to disk]
  • Biological Unit Coordinates (2m5i.pdb1.gz) 37 Kb
  • CSU: Contacts of Structural Units for 2M5I
  • Original NMR restraints for 2M5I from PDB
  • Retrieve 2M5I in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2M5I from S2C, [Save to disk]
  • View 2M5I in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2M5I
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2M5I, from MSDmotif at EBI
  • Fold representative 2m5i from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2m5i] [2m5i_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 2M5I
  • Community annotation for 2M5I at PDBWiki (http://pdbwiki.org)

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