2MPT Ligase date Jun 02, 2014
title Ww3 Domain Of Nedd4l In Complex With Its Hect Domain Py Moti
authors A.Escobedo, M.J.Macias, T.Gomes, E.Aragon, P.Martin-Malpartida, L
compound source
Molecule: E3 Ubiquitin-Protein Ligase Nedd4-Like
Chain: A
Fragment: Ww3 Domain, Unp Residues 496-539
Synonym: Nedd4.2, Nedd4-2
Ec: 6.3.2.-
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Nedd4l, Kiaa0439, Nedl3
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21 De3
Expression_system_vector_type: Vector
Expression_system_vector: Petm11

Molecule: E3 Ubiquitin-Protein Ligase Nedd4-Like
Chain: B
Fragment: Hect Domain Py Motif, Unp Residues 945-957
Synonym: Nedd4.2, Nedd4-2
Ec: 6.3.2.-
Engineered: Yes

Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
methodSolution NMR
ligand NH2 enzyme Ligase E.C.6.3.2 BRENDA
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (253 Kb) [Save to disk]
  • Biological Unit Coordinates (2mpt.pdb1.gz) 13 Kb
  • LPC: Ligand-Protein Contacts for 2MPT
  • CSU: Contacts of Structural Units for 2MPT
  • Original NMR restraints for 2MPT from PDB
  • Retrieve 2MPT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2MPT from S2C, [Save to disk]
  • View 2MPT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2MPT
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2MPT, from MSDmotif at EBI
  • Fold representative 2mpt from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2mpt_A] [2mpt_B] [2mpt]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2MPT: [WW ] by SMART
  • Other resources with information on 2MPT
  • Community annotation for 2MPT at PDBWiki (http://pdbwiki.org)

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