2NO2 Cell Adhesion date Oct 24, 2006
title Crystal Structure Of The Dllrkn-Containing Coiled-Coil Domain Of Huntingtin-Interacting Protein 1
authors J.A.Ybe, S.Mishra, S.Helms, J.Nix
compound source
Molecule: Huntingtin-Interacting Protein 1
Chain: A
Fragment: Residues 480-586
Synonym: Hip-I
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Hip1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Rosetta 2 (De3) Plyss
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pgst-Hip1_482586
symmetry Space Group: P 42 21 2
R_factor 0.286 R_Free 0.313
crystal
cell
length a length b length c angle alpha angle beta angle gamma
54.200 54.200 152.200 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.80 Å
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structure at 2.8 A of the DLLRKN-containing coiled-coil domain of huntingtin-interacting protein 1 (HIP1) reveals a surface suitable for clathrin light chain binding., Ybe JA, Mishra S, Helms S, Nix J, J Mol Biol. 2007 Mar 16;367(1):8-15. Epub 2006 Dec 23. PMID:17257618
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (19 Kb) [Save to disk]
  • Biological Unit Coordinates (2no2.pdb1.gz) 31 Kb
  • CSU: Contacts of Structural Units for 2NO2
  • Likely Quarternary Molecular Structure file(s) for 2NO2
  • Structure Factors (624 Kb)
  • Retrieve 2NO2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2NO2 from S2C, [Save to disk]
  • Re-refined 2no2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2NO2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2NO2
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2NO2, from MSDmotif at EBI
  • Fold representative 2no2 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2no2] [2no2_A]
  • SWISS-PROT database: [O00291]
  • Domain organization of [HIP1_HUMAN] by SWISSPFAM
  • Other resources with information on 2NO2
  • Community annotation for 2NO2 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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