2OZO Transferase date Feb 26, 2007
title Autoinhibited Intact Human Zap-70
authors S.Deindl, T.A.Kadlecek, T.Brdicka, X.Cao, A.Weiss, J.Kuriyan
compound source
Molecule: Tyrosine-Protein Kinase Zap-70
Chain: A
Fragment: Inactive Zap-70 (Residues 1-606)
Synonym: 70 Kda Zeta-Associated Protein, Syk-Related Tyrosine Kinase;
Ec: 2.7.10.2
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Zap70, Srk
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
Expression_system_strain: Triex Sf9
Expression_system_cell: Baculovirus-Infected Insect Cells Sf9;
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pfastbac-1
symmetry Space Group: P 1
R_factor 0.220 R_Free 0.290
crystal
cell
length a length b length c angle alpha angle beta angle gamma
48.297 52.929 69.331 105.91 92.94 103.72
method X-Ray Diffractionresolution 2.60 Å
ligand ANP, MG enzyme Transferase E.C.2.7.10.2 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural basis for the inhibition of tyrosine kinase activity of ZAP-70., Deindl S, Kadlecek TA, Brdicka T, Cao X, Weiss A, Kuriyan J, Cell. 2007 May 18;129(4):735-46. PMID:17512407
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (93 Kb) [Save to disk]
  • Biological Unit Coordinates (2ozo.pdb1.gz) 88 Kb
  • LPC: Ligand-Protein Contacts for 2OZO
  • CSU: Contacts of Structural Units for 2OZO
  • Likely Quarternary Molecular Structure file(s) for 2OZO
  • Structure Factors (151 Kb)
  • Retrieve 2OZO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2OZO from S2C, [Save to disk]
  • Re-refined 2ozo structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2OZO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2OZO
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2OZO, from MSDmotif at EBI
  • Fold representative 2ozo from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ozo_A] [2ozo]
  • SWISS-PROT database: [P43403]
  • Domain organization of [ZAP70_HUMAN] by SWISSPFAM
  • Domains found in 2OZO: [SH2] [TyrKc ] by SMART
  • Other resources with information on 2OZO
  • Community annotation for 2OZO at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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