2PDZ date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffraction, 15 Modelsresolution
related structures by homologous chain: 1QAV
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceSpecific interactions between the syntrophin PDZ domain and voltage-gated sodium channels., Schultz J, Hoffmuller U, Krause G, Ashurst J, Macias MJ, Schmieder P, Schneider-Mergener J, Oschkinat H, Nat Struct Biol 1998 Jan;5(1):19-24. PMID:9437424
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (349 Kb) [Save to disk]
  • Biological Unit Coordinates (2pdz.pdb1.gz) 24 Kb
  • CSU: Contacts of Structural Units for 2PDZ
  • Retrieve 2PDZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2PDZ from S2C, [Save to disk]
  • View 2PDZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2pdz] [2pdz_A] [2pdz_B]
  • SWISS-PROT database: [Q61234]
  • Domain found in 2PDZ: [PDZ ] by SMART

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