2ROL Splicing Signaling Protein date Apr 02, 2008
title Structural Basis Of Pxxdy Motif Recognition In Sh3 Binding
authors O.Aitio, M.Hellman, T.Kesti, I.Kleino, O.Samuilova, H.Tossavainen K.Paakkonen, K.Saksela, P.Permi
compound source
Molecule: Epidermal Growth Factor Receptor Kinase Substrate Protein 1;
Chain: A
Fragment: Sh3 Domain
Synonym: Epidermal Growth Factor Receptor Pathway Substrate Protein 1, Eps8-Like Protein 1;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Eps8l1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Vector
Expression_system_vector: Pet15b

Molecule: 12-Meric Peptide From T-Cell Surface Glycoprotein Epsilon Chain;
Chain: B
Synonym: T-Cell Surface Antigen T3leu-4 Epsilon Chain
Engineered: Yes

Synthetic: Yes
Other_details: Synthetic Construct; This Sequence Occurs Na In Humans.
methodSolution NMR
Primary referenceStructural basis of PxxDY motif recognition in SH3 binding., Aitio O, Hellman M, Kesti T, Kleino I, Samuilova O, Paakkonen K, Tossavainen H, Saksela K, Permi P, J Mol Biol. 2008 Sep 26;382(1):167-78. Epub 2008 Jul 11. PMID:18644376
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (403 Kb) [Save to disk]
  • Biological Unit Coordinates (2rol.pdb1.gz) 21 Kb
  • CSU: Contacts of Structural Units for 2ROL
  • Original NMR restraints for 2ROL from PDB
  • Retrieve 2ROL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2ROL from S2C, [Save to disk]
  • View 2ROL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2ROL
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2ROL, from MSDmotif at EBI
  • Fold representative 2rol from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2rol] [2rol_A] [2rol_B]
  • SWISS-PROT database: [P07766] [Q8TE68]
  • Domain organization of [CD3E_HUMAN] [ES8L1_HUMAN] by SWISSPFAM
  • Domain found in 2ROL: [SH3 ] by SMART
  • Other resources with information on 2ROL
  • Community annotation for 2ROL at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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