2V5W		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	ACE, ALY, K, MCM, ZN	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	Substrate binding to histone deacetylases as shown by the crystal structure of the HDAC8-substrate complex., Vannini A, Volpari C, Gallinari P, Jones P, Mattu M, Carfi A, De Francesco R, Steinkuhler C, Di Marco S, EMBO Rep. 2007 Sep;8(9):879-84. Epub 2007 Aug 10. PMID:17721440

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (136 Kb) [Save to disk] Biological Unit Coordinates (2v5w.pdb1.gz) 65 Kb Biological Unit Coordinates (2v5w.pdb2.gz) 67 Kb LPC: Ligand-Protein Contacts for 2V5W CSU: Contacts of Structural Units for 2V5W Likely Quarternary Molecular Structure file(s) for 2V5W Structure Factors (907 Kb) Retrieve 2V5W in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2V5W from S2C, [Save to disk] Re-refined 2v5w structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2V5W in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2v5w] [2v5w_A] [2v5w_B] [2v5w_G] [2v5w_I] [2v5w_L] SWISS-PROT database: [Q9BY41]

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