2V7O Transferase date Jul 31, 2007
title Crystal Structure Of Human Calcium-Calmodulin-Dependent Prot II Gamma
authors A.C.W.Pike, P.Rellos, O.Fedorov, N.Burgess-Brown, L.Shrestha, E.U E.S.Pilka, F.Von Delft, A.Edwards, J.Weigelt, C.H.Arrowsmith, M.Sundstrom, S.Knapp
compound source
Molecule: Calciumcalmodulin-Dependent Protein Kinase Type Chain;
Chain: A
Fragment: Kinase Domain, Residues 5-315
Synonym: Cam-Kinase II Gamma Chain, Cam Kinase II Gamma Sub Camk-II Subunit Gamma, Calcium-Calmodulin-Dependent Protein Gamma;
Ec: 2.7.11.17
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21 (De3) Rosetta
Expression_system_variant: R3
Expression_system_plasmid: Pnic28-Bsa4
symmetry Space Group: C 2 2 21
R_factor 0.176 R_Free 0.241
crystal
cell
length a length b length c angle alpha angle beta angle gamma
84.703 117.226 75.968 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.25 Å
ligand DRN, EDO, SEP enzyme Transferase E.C.2.7.11.17 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure of the CaMKIIdelta/calmodulin complex reveals the molecular mechanism of CaMKII kinase activation., Rellos P, Pike AC, Niesen FH, Salah E, Lee WH, von Delft F, Knapp S, PLoS Biol. 2010 Jul 27;8(7):e1000426. PMID:20668654
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (58 Kb) [Save to disk]
  • Biological Unit Coordinates (2v7o.pdb1.gz) 53 Kb
  • LPC: Ligand-Protein Contacts for 2V7O
  • CSU: Contacts of Structural Units for 2V7O
  • Likely Quarternary Molecular Structure file(s) for 2V7O
  • Structure Factors (252 Kb)
  • Retrieve 2V7O in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2V7O from S2C, [Save to disk]
  • Re-refined 2v7o structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2V7O in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2V7O
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2V7O, from MSDmotif at EBI
  • Fold representative 2v7o from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2v7o] [2v7o_A]
  • SWISS-PROT database: [Q13555]
  • Domain organization of [KCC2G_HUMAN] by SWISSPFAM
  • Domain found in 2V7O: [S_TKc ] by SMART
  • Other resources with information on 2V7O
  • Community annotation for 2V7O at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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