2VGZ	Transferase	date	Nov 16, 2007
title	Crystal Structure Of Human Kynurenine Aminotransferase II
authors	F.Rossi, S.Garavaglia, V.Montalbano, M.A.Walsh, M.Rizzi
compound		source
Molecule: Kynureninealpha-Aminoadipate Aminotransferase Chain: A, B Fragment: Residues 2-425 Synonym: Kynurenine Aminotransferase II, Kataadat, Kynurenine--Oxoglutarate Transaminase II, Kynurenine--Oxog Aminotransferase II, 2-Aminoadipate Transaminase, 2-Aminoa Aminotransferase, Alpha-Aminoadipate Aminotransferase, Aad Ec: 2.6.1.39, 2.6.1.7 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet16b
symmetry	Space Group: P 21 21 2	R_factor 0.182 R_Free 0.243
crystal cell	length a length b length c angle alpha angle beta angle gamma 99.631 154.956 61.201 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.3 Å
ligand	IOD, PLP	enzyme	Transferase E.C.2.6.1.39 BRENDA
Gene Ontology	Chain Function Process Component A, B kynurenine-oxoglutarate tran...
Primary reference	Crystal Structure of Human Kynurenine Aminotransferase II, a Drug Target for the Treatment of Schizophrenia., Rossi F, Garavaglia S, Montalbano V, Walsh MA, Rizzi M, J Biol Chem. 2008 Feb 8;283(6):3559-66. Epub 2007 Dec 5. PMID:18056996

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (145 Kb) [Save to disk] Biological Unit Coordinates (2vgz.pdb1.gz) 139 Kb LPC: Ligand-Protein Contacts for 2VGZ CSU: Contacts of Structural Units for 2VGZ Likely Quarternary Molecular Structure file(s) for 2VGZ Structure Factors (415 Kb) Retrieve 2VGZ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2VGZ from S2C, [Save to disk] Re-refined 2vgz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2VGZ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2VGZ

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2VGZ, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2vgz_B] [2vgz] [2vgz_A] SWISS-PROT database: [Q8N5Z0] Domain organization of [AADAT_HUMAN] by SWISSPFAM

Other resources with information on 2VGZ

Community annotation for 2VGZ at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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